Domain ID e3sdjD2

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  • A: alpha bundles
  • X: Four-helical up-and-down bundle
  • H: HEPN
  • T: Nucleotidyltransferase substrate binding subunit/domain
  • F: Ribonuc_2-5A
UID: 001770576
Type: Automatic domain
Parent: e4o1pC3
Range: D:981-1115
PDB: 3sdj
PDB Description: SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1
UniProt: P32361
Hsap BLAST neighbor: Q76MJ5
Species:

Structure of domain e3sdjD2

Domains in the same chain:

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e3sdjD1 D:663-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjD2 D:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain

Domains in the same PDB:

e3sdjA1 A:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjA2 A:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjB1 B:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjB2 B:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjC1 C:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjC2 C:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjD1 D:663-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjD2 D:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjE1 E:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjE2 E:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjF1 F:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjF2 F:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjG1 G:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjG2 G:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjH1 H:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjH2 H:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjI1 I:672-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjI2 I:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjJ1 J:672-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjJ2 J:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjK1 K:663-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjK2 K:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjL1 L:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjL2 L:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjM1 M:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjM2 M:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdjN1 N:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdjN2 N:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain

Structural contacts of domain e3sdjD2 of H-group "HEPN":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sdjC1 D:x,y,z->C:X,Y,Z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol
e3sdjC2 D:x,y,z->C:X,Y,Z HEPN Interaction Interface Pymol
e3sdjA2 D:x,y,z->A:X,Y,Z HEPN Interaction Interface Pymol
e3sdjA1 D:x,y,z->A:X,Y,Z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol
e3sdjE1 D:X,Y,Z->E:x,y,z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol