Domain ID e3srfD3

Download files:
  • A: a/b three-layered sandwiches
  • X: PK C-terminal domain-like
  • H: PK C-terminal domain-like
  • T: PK C-terminal domain-like
  • F: PK_C
UID: 001518215
Type: Automatic domain
Parent: e2g50A3
Range: D:396-530
Ligands: GOL PO4
PDB: 3srf
PDB Description: PYRUVATE KINASE ISOZYMES M1/M2
UniProt: P14618
Hsap BLAST neighbor: P14618
Species: Homo sapiens

Structure of domain e3srfD3

Domains in the same chain:

e3srfD2 D:12-115,D:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfD1 D:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfD3 D:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like

Domains in the same PDB:

e3srfA2 A:12-115,A:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfA1 A:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfA3 A:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfB2 B:13-115,B:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfB3 B:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfB1 B:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfC1 C:12-115,C:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfC2 C:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfC3 C:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfD2 D:12-115,D:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfD1 D:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfD3 D:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfE2 E:13-115,E:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfE1 E:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfE3 E:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfF1 F:13-115,F:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfF2 F:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfF3 F:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfG1 G:13-115,G:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfG3 G:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfG2 G:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3srfH1 H:12-115,H:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3srfH3 H:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3srfH2 H:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like

Structural contacts of domain e3srfD3 of H-group "PK C-terminal domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3srfC1 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e3srfH1 D:X,Y,Z->H:x,y,z TIM barrels Interaction Interface Pymol
e3srfH2 D:X,Y,Z->H:x,y,z PK C-terminal domain-like Interaction Interface Pymol