Domain ID e3t1hR1

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Ribosomal_S18
UID: 000147549
Type: Automatic domain
Parent: e2uubR1
Range: R:16-88
PDB: 3t1h
PDB Description: 30S RIBOSOMAL PROTEIN S18
UniProt: P80382
Hsap BLAST neighbor: Q9Y3D5
Species: Thermus thermophilus

Structure of domain e3t1hR1

Domains in the same chain:

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e3t1hR1 R:16-88 HTH HTH tri-helical

Domains in the same PDB:

e3t1hB1 B:7-127,B:157-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e3t1hC1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3t1hC2 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3t1hD1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3t1hE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3t1hE3 E:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3t1hF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3t1hG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3t1hH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3t1hH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3t1hI1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3t1hJ1 J:1-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3t1hK1 K:1-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3t1hL1 L:4-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3t1hM1 M:2-126 HhH/H2TH H2TH H2TH
e3t1hN1 N:1-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3t1hO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3t1hP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3t1hQ1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3t1hR1 R:16-88 HTH HTH tri-helical
e3t1hS1 S:2-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e3t1hT1 T:1-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3t1hR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3t1hF1 R:x,y,z->F:X,Y,Z Ribosomal protein S6 Interaction Interface Pymol
e3t1hK1 R:x,y,z->K:X,Y,Z Ribonuclease H-like Interaction Interface Pymol