ECOD: domain e3t5oA8

Domain ID e3t5oA8

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: Complement control module/SCR domain
F: Sushi

UID:	000223905
Type:	Manual and representative domain
Range:	A:681-744
PDB:	3t5o
PDB Description:	COMPLEMENT COMPONENT C6
UniProt:	P13671
Hsap BLAST neighbor:	P13671
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3t5oA1	A:1-58	TSP-1 type 1 repeat	TSP-1 type 1 repeat	TSP-1 type 1 repeat
e3t5oA2	A:59-115	TSP-1 type 1 repeat	TSP-1 type 1 repeat	TSP-1 type 1 repeat
e3t5oA3	A:116-157	EGF-like	LDL receptor-like module	LDL receptor-like module
e3t5oA4	A:158-498	Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains
e3t5oA5	A:499-536	EGF-like	EGF-related	EGF/Laminin
e3t5oA6	A:537-608	TSP-1 type 1 repeat	TSP-1 type 1 repeat	TSP-1 type 1 repeat
e3t5oA7	A:620-680	EGF-like	EGF-related	Complement control module/SCR domain
e3t5oA8	A:681-744	EGF-like	EGF-related	Complement control module/SCR domain
e3t5oA9	A:750-764	EGF-like	EGF-related	EGF/Laminin
e3t5oA10	A:765-832	Kazal-type serine protease inhibitors-like	Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors
e3t5oA11	A:833-860	EGF-like	EGF-related	EGF/Laminin
e3t5oA12	A:861-913	Kazal-type serine protease inhibitors-like	Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors

Domains in the same PDB:

e3t5oA1	A:1-58	TSP-1 type 1 repeat	TSP-1 type 1 repeat	TSP-1 type 1 repeat
e3t5oA2	A:59-115	TSP-1 type 1 repeat	TSP-1 type 1 repeat	TSP-1 type 1 repeat
e3t5oA3	A:116-157	EGF-like	LDL receptor-like module	LDL receptor-like module
e3t5oA4	A:158-498	Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains
e3t5oA5	A:499-536	EGF-like	EGF-related	EGF/Laminin
e3t5oA6	A:537-608	TSP-1 type 1 repeat	TSP-1 type 1 repeat	TSP-1 type 1 repeat
e3t5oA7	A:620-680	EGF-like	EGF-related	Complement control module/SCR domain
e3t5oA8	A:681-744	EGF-like	EGF-related	Complement control module/SCR domain
e3t5oA9	A:750-764	EGF-like	EGF-related	EGF/Laminin
e3t5oA10	A:765-832	Kazal-type serine protease inhibitors-like	Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors
e3t5oA11	A:833-860	EGF-like	EGF-related	EGF/Laminin
e3t5oA12	A:861-913	Kazal-type serine protease inhibitors-like	Kazal-type serine protease inhibitors	Kazal-type serine protease inhibitors

Structural contacts of domain e3t5oA8 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3t5oA2	A:x,y,z->A:X-1/2,-Y+1/2,-Z-1	TSP-1 type 1 repeat	Interaction Interface Pymol
e3t5oA7	A:x,y,z->A:-X-1,-Y+1,Z	EGF-related	Interaction Interface Pymol
e3t5oA8	A:x,y,z->A:-X-1,-Y+1,Z	EGF-related	Interaction Interface Pymol
e3t5oA7	A:-X-1,-Y+1,Z->A:x,y,z	EGF-related	Interaction Interface Pymol
e3t5oA8	A:-X-1,-Y+1,Z->A:x,y,z	EGF-related	Interaction Interface Pymol
e3t5oA5	A:-X-1/2,Y-1/2,-Z-1->A:x,y,z	EGF-related	Interaction Interface Pymol
e3t5oA1	A:-X-1/2,Y-1/2,-Z->A:x,y,z	TSP-1 type 1 repeat	Interaction Interface Pymol