| UID: | 000432332 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1v8pA1 |
| Range: | E:1-132 |
| Ligands: | SO4 |
| PDB: | 3tnd |
| PDB Description: | tRNA(fMet)-specific endonuclease VapC |
| UniProt: | O06662 |
| Species: | Shigella flexneri |
Structure of domain e3tndE1
Domains in the same chain:
| e3tndE1 | E:1-132 | HAD domain-like | HAD domain-related | PIN domain-like |
Domains in the same PDB:
Structural contacts of domain e3tndE1 of H-group "HAD domain-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3tndF1 | E:X,Y,Z->F:x,y,z | RIFT-related | Interaction Interface Pymol |
| e3tndC1 | E:x,y,z->C:X,Y,Z | HAD domain-related | Interaction Interface Pymol |
| e3tndE1 | E:x,y,z->E:X-Y,-Y,-Z+1 | HAD domain-related | Interaction Interface Pymol |
| e3tndE1 | E:X-Y,-Y,-Z+1->E:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e3tndG1 | E:X,Y,Z->G:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e3tndD1 | E:X,Y,Z->D:x,y,z | RIFT-related | Interaction Interface Pymol |
