ECOD: domain e3u5zA2

Domain ID e3u5zA2

A: alpha arrays
X: HTH
H: HTH
T: HTH domain in DNA polymerase accessory protein 62
F: Phage_clamp_A

UID:	001019405
Type:	Manual and representative domain
Range:	A:113-187
PDB:	3u5z
PDB Description:	DNA POLYMERASE ACCESSORY PROTEIN 62
UniProt:	P04527
Species:

Domains in the same chain:

Download Pymol

e3u5zA1	A:2-112	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zA2	A:113-187	HTH	HTH	HTH domain in DNA polymerase accessory protein 62

Domains in the same PDB:

e3u5zA1	A:2-112	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zA2	A:113-187	HTH	HTH	HTH domain in DNA polymerase accessory protein 62
e3u5zB1	B:0-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zB3	B:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zB4	B:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zC1	C:0-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zC3	C:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zC4	C:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zD3	D:0-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zD2	D:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zD4	D:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zE1	E:2-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zE3	E:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zE2	E:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zF1	F:7001-7110	DNA clamp	DNA clamp	DNA clamp
e3u5zF2	F:7111-7228	DNA clamp	DNA clamp	DNA clamp
e3u5zG1	G:5001-5110	DNA clamp	DNA clamp	DNA clamp
e3u5zG2	G:5111-5228	DNA clamp	DNA clamp	DNA clamp
e3u5zH1	H:6001-6110	DNA clamp	DNA clamp	DNA clamp
e3u5zH2	H:6111-6228	DNA clamp	DNA clamp	DNA clamp
e3u5zK2	K:2-112	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zK1	K:113-187	HTH	HTH	HTH domain in DNA polymerase accessory protein 62
e3u5zL2	L:0-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zL4	L:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zL1	L:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zM1	M:0-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zM2	M:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zM3	M:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zN3	N:0-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zN1	N:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zN4	N:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zO3	O:2-159	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u5zO4	O:160-257	Histone-like	Histone-related	AAA+ ATPase lid domain
e3u5zO1	O:258-319	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e3u5zP1	P:7001-7110	DNA clamp	DNA clamp	DNA clamp
e3u5zP2	P:7111-7228	DNA clamp	DNA clamp	DNA clamp
e3u5zQ1	Q:5001-5110	DNA clamp	DNA clamp	DNA clamp
e3u5zQ2	Q:5111-5228	DNA clamp	DNA clamp	DNA clamp
e3u5zR1	R:6001-6110	DNA clamp	DNA clamp	DNA clamp
e3u5zR2	R:6111-6228	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e3u5zA2 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3u5zE2	A:x,y,z->E:X,Y,Z	DNA polymerase III clamp loader subunits, C-terminal domain	Interaction Interface Pymol
e3u5zE1	A:x,y,z->E:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e3u5zE3	A:x,y,z->E:X,Y,Z	Histone-related	Interaction Interface Pymol
e3u5zM3	A:x,y,z->M:-X-1,Y-1/2,-Z+1/2	DNA polymerase III clamp loader subunits, C-terminal domain	Interaction Interface Pymol