ECOD: domain e3udfA2

Domain ID e3udfA2

A: a+b three layers
X: Profilin-like
H: a+b domain in beta-lactamase/transpeptidase-like proteins
T: a+b domain in beta-lactamase/transpeptidase-like proteins
F: Transpeptidase

UID:	001790159
Type:	Manual and representative domain
Range:	A:236-294,A:392-430,A:531-579,A:626-735
Ligands:	MES
PDB:	3udf
PDB Description:	Penicillin-binding protein 1a
UniProt:	G1C794
Species:	Acinetobacter baumannii

Domains in the same chain:

Download Pymol

e3udfA1	A:27-72,A:134-235	Lysozyme-like	Lysozyme-like	Lysozyme-like
e3udfA2	A:236-294,A:392-430,A:531-579,A:626-735	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e3udfA4	A:295-391	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3udfA3	A:431-530	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e3udfA1	A:27-72,A:134-235	Lysozyme-like	Lysozyme-like	Lysozyme-like
e3udfA2	A:236-294,A:392-430,A:531-579,A:626-735	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e3udfA4	A:295-391	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3udfA3	A:431-530	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3udfB7	B:27-72,B:134-235	Lysozyme-like	Lysozyme-like	Lysozyme-like
e3udfB3	B:236-294,B:392-430,B:531-579,B:626-737	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e3udfB5	B:295-391	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3udfB6	B:431-530	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e3udfA2 of H-group "a+b domain in beta-lactamase/transpeptidase-like proteins":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3udfB7	A:X,Y,Z->B:x,y,z	Lysozyme-like	Interaction Interface Pymol
e3udfB3	A:-X+3/2,Y-1/2,-Z->B:x,y,z	a+b domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e3udfB6	A:-X+3/2,Y-1/2,-Z->B:x,y,z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e3udfA3	A:x,y,z->A:X,Y,Z-1	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol