Domain ID e3udfB6

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  • A: alpha complex topology
  • X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • F: Transpeptidase
UID: 001793518
Type: Automatic domain
Parent: e3udfA3
Range: B:431-530
Ligands: MES
PDB: 3udf
PDB Description: Penicillin-binding protein 1a
UniProt: G1C794
Species: Acinetobacter baumannii

Structure of domain e3udfB6

Domains in the same chain:

e3udfB7 B:27-72,B:134-235 Lysozyme-like Lysozyme-like Lysozyme-like
e3udfB3 B:236-294,B:392-430,B:531-579,B:626-737 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3udfB5 B:295-391 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3udfB6 B:431-530 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e3udfA1 A:27-72,A:134-235 Lysozyme-like Lysozyme-like Lysozyme-like
e3udfA2 A:236-294,A:392-430,A:531-579,A:626-735 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3udfA4 A:295-391 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3udfA3 A:431-530 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3udfB7 B:27-72,B:134-235 Lysozyme-like Lysozyme-like Lysozyme-like
e3udfB3 B:236-294,B:392-430,B:531-579,B:626-737 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3udfB5 B:295-391 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3udfB6 B:431-530 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e3udfB6 of H-group "alpha-helical domain in beta-lactamase/transpeptidase-like proteins":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3udfA1 B:x,y,z->A:X,Y,Z Lysozyme-like Interaction Interface Pymol
e3udfA2 B:x,y,z->A:-X+3/2,Y-1/2,-Z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3udfA3 B:x,y,z->A:-X+3/2,Y-1/2,-Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3udfA3 B:x,y,z->A:-X+3/2,Y-1/2,-Z+1 alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol