Domain ID e3uoqL1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 000972356
Type: Automatic domain
Parent: e2uubL1
Range: L:0-121
PDB: 3uoq
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e3uoqL1

Domains in the same chain:

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e3uoqL1 L:0-121 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e3uoqC2 C:0-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3uoqC1 C:105-205 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3uoqE4 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3uoqE3 E:77-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3uoqF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3uoqG1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3uoqH1 H:0-62 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3uoqH2 H:63-127 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3uoqJ1 J:1-98 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3uoqK2 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3uoqL1 L:0-121 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3uoqN1 N:0-90 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3uoqO2 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3uoqP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3uoqR1 R:0-54 HTH HTH tri-helical
e3uoqT1 T:0-82 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3uoqW2 W:3-281 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3uoqW6 W:282-390 cradle loop barrel RIFT-related Alanine racemase-C
e3uoqW5 W:391-527 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e3uoqL1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3uoqW5 L:X,Y,Z->W:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol
e3uoqH2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol