Domain ID e3upnB1

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  • A: a+b three layers
  • X: Profilin-like
  • H: a+b domain in beta-lactamase/transpeptidase-like proteins
  • T: a+b domain in beta-lactamase/transpeptidase-like proteins
  • F: Transpeptidase
UID: 001770708
Type: Automatic domain
Parent: e1pyyA6
Range: B:129-184,B:209-218,B:343-488
Ligands: IM2
PDB: 3upn
PDB Description: PENICILLIN-BINDING PROTEIN A
UniProt: P9WKD1
Species: Mycobacterium tuberculosis

Structure of domain e3upnB1

Domains in the same chain:

e3upnB3 B:46-136 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3upnB1 B:129-184,B:209-218,B:343-488 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3upnB2 B:219-342 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e3upnA4 A:44-136 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3upnA2 A:129-185,A:210-218,A:344-488 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3upnA3 A:219-343 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3upnB3 B:46-136 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e3upnB1 B:129-184,B:209-218,B:343-488 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3upnB2 B:219-342 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e3upnB1 of H-group "a+b domain in beta-lactamase/transpeptidase-like proteins":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3upnB3 B:x,y,z->B:X-Y-1,X-1,Z+1/6 Penicillin binding protein dimerisation domain Interaction Interface Pymol
e3upnB1 B:x,y,z->B:X-Y-1,X-1,Z+1/6 a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3upnB1 B:X-Y-1,X-1,Z+1/6->B:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3upnB3 B:X-Y-1,X-1,Z+1/6->B:x,y,z Penicillin binding protein dimerisation domain Interaction Interface Pymol
e3upnB2 B:X-Y-1,X-1,Z+1/6->B:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3upnA2 B:x,y,z->A:X,Y,Z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3upnA3 B:x,y,z->A:-X,-Y-1,Z-1/2 alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol