Domain ID e3uzmH3

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 001277403
Type: Automatic domain
Parent: e1pkpA2
Range: H:73-155
Ligands: MG
PDB: 3uzm
PDB Description:
Species:

Structure of domain e3uzmH3

Domains in the same chain:

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e3uzmH4 H:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3uzmH3 H:73-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3uzmF2 F:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3uzmF1 F:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3uzmH4 H:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3uzmH3 H:73-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3uzmI1 I:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3uzmJ1 J:1-155 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3uzmK1 K:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3uzmK2 K:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3uzmM1 M:1-98 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3uzmN1 N:1-119 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3uzmO1 O:4-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3uzmQ1 Q:1-60 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3uzmR2 R:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3uzmS1 S:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3uzmU2 U:17-88 HTH HTH tri-helical
e3uzmW1 W:1-99 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3uzmH3 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3uzmK1 H:X,Y,Z->K:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e3uzmK2 H:X,Y,Z->K:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol