Domain ID e3v28F1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S6
  • T: Ribosomal protein S6
  • F: Ribosomal_S6
UID: 000963572
Type: Automatic domain
Parent: e1louA1
Range: F:1-101
PDB: 3v28
PDB Description:
Species:

Structure of domain e3v28F1

Domains in the same chain:

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e3v28F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6

Domains in the same PDB:

e3v28C2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3v28C1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3v28E4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3v28E3 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3v28F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3v28G1 G:1-155 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3v28H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3v28H2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3v28J1 J:1-98 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3v28K1 K:1-119 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3v28L1 L:4-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3v28N1 N:1-60 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3v28O2 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3v28P1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3v28R2 R:20-87 HTH HTH tri-helical
e3v28T1 T:1-99 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3v28X1 X:1-95 dsRBD-like Ribosome binding protein Y (YfiA homologue) Ribosome binding protein Y (YfiA homologue)

Structural contacts of domain e3v28F1 of H-group "Ribosomal protein S6":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3v28R2 F:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol
e3v28O2 F:X,Y,Z->O:x,y,z S15/NS1 RNA-binding domain Interaction Interface Pymol