Domain ID e3v6wU1

Download files:
  • A: alpha arrays
  • X: PABP domain-like
  • H: Ribosomal protein L20
  • T: Ribosomal protein L20
  • F: Ribosomal_L20
UID: 000224908
Type: Automatic domain
Parent: e4v19U1
Range: U:2-118
PDB: 3v6w
PDB Description:
Hsap BLAST neighbor: Q9BYC9
Species:

Structure of domain e3v6wU1

Domains in the same chain:

Download Pymol

e3v6wU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20

Domains in the same PDB:

e3v6w01 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3v6w11 1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3v6w21 2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3v6w31 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3v6w41 4:36-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3v6w51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3v6w61 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3v6w71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3v6w81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3v6w91 9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3v6wC1 C:18-66,C:159-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3v6wC2 C:67-158 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3v6wD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3v6wD2 D:127-273 SH3 SH3 SH3
e3v6wF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3v6wG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3v6wH3 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3v6wH1 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3v6wI2 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3v6wI1 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3v6wN1 N:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3v6wO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3v6wR1 R:1-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3v6wU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3v6wV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3v6wW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3v6wX1 X:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3v6wY2 Y:2-102 SH3 SH3 SH3
e3v6wZ1 Z:3-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3v6wZ2 Z:93-179 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e3v6wU1 of H-group "Ribosomal protein L20":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3v6wV1 U:X,Y,Z->V:x,y,z Ribosomal protein L21p Interaction Interface Pymol
e3v6wN1 U:x,y,z->N:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol