ECOD: domain e3vk8A1

Domain ID e3vk8A1

A: alpha arrays
X: HhH/H2TH
H: H2TH
T: H2TH
F: H2TH

UID:	000436099
Type:	Automatic domain
Parent:	e1r2zA2
Range:	A:135-238
PDB:	3vk8
PDB Description:	Probable formamidopyrimidine-DNA glycosylase
UniProt:	Q5UQ00
Species:	Acanthamoeba polyphaga mimivirus

Domain
In chain context
In PDB context

Structure of domain e3vk8A1

Domains in the same chain:

Download Pymol

e3vk8A3	A:2-134	MutM N-terminal domain-like	N-terminal domain of MutM-like DNA repair proteins	N-terminal domain of MutM-like DNA repair proteins
e3vk8A1	A:135-238	HhH/H2TH	H2TH	H2TH
e3vk8A2	A:239-289	Glucocorticoid receptor-like	C-terminal, Zn-finger domain of MutM-like DNA repair proteins	C-terminal, Zn-finger domain of MutM-like DNA repair proteins

Domains in the same PDB:

e3vk8A3	A:2-134	MutM N-terminal domain-like	N-terminal domain of MutM-like DNA repair proteins	N-terminal domain of MutM-like DNA repair proteins
e3vk8A1	A:135-238	HhH/H2TH	H2TH	H2TH
e3vk8A2	A:239-289	Glucocorticoid receptor-like	C-terminal, Zn-finger domain of MutM-like DNA repair proteins	C-terminal, Zn-finger domain of MutM-like DNA repair proteins
e3vk8B3	B:2-134	MutM N-terminal domain-like	N-terminal domain of MutM-like DNA repair proteins	N-terminal domain of MutM-like DNA repair proteins
e3vk8B1	B:135-238	HhH/H2TH	H2TH	H2TH
e3vk8B2	B:239-289	Glucocorticoid receptor-like	C-terminal, Zn-finger domain of MutM-like DNA repair proteins	C-terminal, Zn-finger domain of MutM-like DNA repair proteins

Structural contacts of domain e3vk8A1 of H-group "H2TH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vk8B3	A:x,y,z->B:X,Y,Z-1	N-terminal domain of MutM-like DNA repair proteins	Interaction Interface Pymol