Domain ID e3vqsC3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_3
UID: 001261577
Type: Automatic domain
Parent: e1gx5A2
Range: C:1-353
Ligands: CL JT1
PDB: 3vqs
PDB Description: RNA-DIRECTED RNA POLYMERASE
UniProt: P26663
Species: Hepatitis C virus

Structure of domain e3vqsC3

Domains in the same chain:

e3vqsC3 C:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3vqsC4 C:354-556 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e3vqsA2 A:1-352 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3vqsA1 A:353-553 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3vqsB3 B:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3vqsB4 B:354-557 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3vqsC3 C:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3vqsC4 C:354-556 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3vqsD3 D:1-358 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3vqsD4 D:359-553 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e3vqsC3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vqsD3 C:X-1/2,-Y+3/2,-Z->D:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3vqsB4 C:X-1,Y,Z->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3vqsA2 C:-X+1,Y-1/2,-Z+1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3vqsB3 C:X-1/2,-Y+3/2,-Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3vqsB4 C:X-1/2,-Y+3/2,-Z->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3vqsA2 C:X,Y-1,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3vqsB3 C:x,y,z->B:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3vqsD4 C:X-1/2,-Y+1/2,-Z->D:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol