Domain ID e3vr4B3

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: ATP-synt_ab_N
UID: 000154856
Type: Automatic domain
Parent: e2jdiA1
Range: B:-6-69
PDB: 3vr4
PDB Description: V-TYPE SODIUM ATPASE CATALYTIC SUBUNIT A
UniProt: Q08636
Hsap BLAST neighbor: P38606
Species: Enterococcus hirae

Structure of domain e3vr4B3

Domains in the same chain:

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e3vr4B3 B:-6-69 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4B4 B:70-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4B2 B:442-586 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e3vr4A1 A:-6-63 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4A3 A:64-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4A2 A:436-580 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr4B3 B:-6-69 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4B4 B:70-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4B2 B:442-586 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr4C1 C:-6-62 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4C3 C:64-441 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4C2 C:435-579 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr4D6 D:4-77 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4D4 D:78-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4D5 D:356-455 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr4E6 E:4-77 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4E4 E:78-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4E5 E:356-455 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr4F6 F:1-77 cradle loop barrel RIFT-related Alanine racemase-C
e3vr4F4 F:78-355 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3vr4F5 F:356-455 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3vr4H1 H:2-103 Flavodoxin-like AtpF-like AtpF-like

Structural contacts of domain e3vr4B3 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vr4E6 B:X,Y,Z->E:x,y,z RIFT-related Interaction Interface Pymol
e3vr4F6 B:X,Y,Z->F:x,y,z RIFT-related Interaction Interface Pymol
e3vr4E5 B:-X,Y-1/2,-Z+1/2->E:x,y,z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol