ECOD: domain e3vthB5

Domain ID e3vthB5

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: HypF_C

UID:	001139064
Type:	Automatic and representative domain
Range:	B:391-498
Ligands:	AP2 FE GOL PO4
PDB:	3vth
PDB Description:	Hydrogenase maturation factor
UniProt:	Q8RDB0
Species:

Domains in the same chain:

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Domains in the same PDB:

e3vthA9	A:3-105	Alpha-beta plaits	Acylphosphatase-like	Acylphosphatase-like
e3vthA5	A:106-141	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vthA2	A:142-191	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vthA7	A:192-390	YrdC/RibB	YrdC/RibB	YrdC/RibB
e3vthA10	A:391-495	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vthA8	A:496-755	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vthB2	B:103-141	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vthB1	B:142-191	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vthB3	B:201-390	YrdC/RibB	YrdC/RibB	YrdC/RibB
e3vthB5	B:391-498	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vthB4	B:499-755	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e3vthB5 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vthA10	B:x,y,z->A:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol
e3vthA8	B:x,y,z->A:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol