| UID: | 001295865 |
|---|---|
| Type: | Manual and representative domain |
| Range: | F:312-412 |
| PDB: | 3wod |
| PDB Description: | RNA polymerase sigma factor |
| UniProt: | Q5SKW1 |
| Species: |
Structure of domain e3wodF2
Domains in the same chain:
| e3wodF1 | F:74-255 | Sigma2 domain-like | Sigma2 domain of RNA polymerase sigma factors | Sigma2 domain of RNA polymerase sigma factors |
| e3wodF2 | F:312-412 | HTH | HTH | tri-helical |
Domains in the same PDB:
Structural contacts of domain e3wodF2 of H-group "HTH":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3wodD5 | F:x,y,z->D:X,Y,Z | N-terminal domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e3wodC13 | F:x,y,z->C:X,Y,Z | C-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e3wodC6 | F:x,y,z->C:X,Y,Z | alpha/beta-Hammerhead/Barrel-sandwich hybrid | Interaction Interface Pymol |
| e3wodG1 | F:X,Y,Z->G:x,y,z | Thermus phage P23-45 gp39 | Interaction Interface Pymol |
| e3wodH1 | F:x,y,z->H:-Y-1,X-Y,Z-1/3 | Thermus phage P23-45 gp39 | Interaction Interface Pymol |
| e3wodA2 | F:x,y,z->A:-Y-1,X-Y,Z-1/3 | Insert subdomain of RNA polymerase alpha subunit | Interaction Interface Pymol |
