Domain ID e3wxmB3

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: eRF1_2
UID: 001347630
Type: Automatic domain
Parent: e1dt9A3
Range: B:126-252
PDB: 3wxm
PDB Description: Protein pelota homolog
UniProt: Q9YAZ5
Species:

Structure of domain e3wxmB3

Domains in the same chain:

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e3wxmB1 B:-1-125 SH3 Dom34/Pelota N-terminal domain-like Dom34/Pelota N-terminal domain-like
e3wxmB3 B:126-252 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3wxmB2 B:253-355 Bacillus chorismate mutase-like L30e-like L30e-like

Domains in the same PDB:

e3wxmA1 A:4-229 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3wxmA2 A:228-322 cradle loop barrel RIFT-related Alanine racemase-C
e3wxmA3 A:323-435 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3wxmB1 B:-1-125 SH3 Dom34/Pelota N-terminal domain-like Dom34/Pelota N-terminal domain-like
e3wxmB3 B:126-252 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3wxmB2 B:253-355 Bacillus chorismate mutase-like L30e-like L30e-like
e3wxmC1 C:4-229 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3wxmC3 C:228-322 cradle loop barrel RIFT-related Alanine racemase-C
e3wxmC2 C:323-434 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3wxmD1 D:-1-125 SH3 Dom34/Pelota N-terminal domain-like Dom34/Pelota N-terminal domain-like
e3wxmD3 D:126-252 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3wxmD2 D:253-355 Bacillus chorismate mutase-like L30e-like L30e-like
e3wxmE2 E:3-229 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3wxmE1 E:228-322 cradle loop barrel RIFT-related Alanine racemase-C
e3wxmE3 E:323-432 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3wxmF3 F:0-125 SH3 Dom34/Pelota N-terminal domain-like Dom34/Pelota N-terminal domain-like
e3wxmF1 F:126-252 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3wxmF2 F:253-354 Bacillus chorismate mutase-like L30e-like L30e-like
e3wxmG1 G:3-229 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3wxmG3 G:228-322 cradle loop barrel RIFT-related Alanine racemase-C
e3wxmG2 G:323-434 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e3wxmH2 H:-1-125 SH3 Dom34/Pelota N-terminal domain-like Dom34/Pelota N-terminal domain-like
e3wxmH1 H:126-252 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3wxmH3 H:253-354 Bacillus chorismate mutase-like L30e-like L30e-like

Structural contacts of domain e3wxmB3 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3wxmA3 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e3wxmA1 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3wxmA2 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e3wxmH1 B:x,y,z->H:X-1/2,-Y+1/2,-Z Ribonuclease H-like Interaction Interface Pymol
e3wxmH2 B:x,y,z->H:X-1/2,-Y+1/2,-Z Dom34/Pelota N-terminal domain-like Interaction Interface Pymol
e3wxmF3 B:X,Y,Z->F:x,y,z Dom34/Pelota N-terminal domain-like Interaction Interface Pymol