ECOD: domain e3wxmD3

Domain ID e3wxmD3

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: eRF1_2

UID:	001347633
Type:	Automatic domain
Parent:	e1dt9A3
Range:	D:126-252
PDB:	3wxm
PDB Description:	Protein pelota homolog
UniProt:	Q9YAZ5
Species:

Domains in the same chain:

Download Pymol

e3wxmD1	D:-1-125	SH3	Dom34/Pelota N-terminal domain-like	Dom34/Pelota N-terminal domain-like
e3wxmD3	D:126-252	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3wxmD2	D:253-355	Bacillus chorismate mutase-like	L30e-like	L30e-like

Domains in the same PDB:

e3wxmA1	A:4-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3wxmA2	A:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e3wxmA3	A:323-435	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e3wxmB1	B:-1-125	SH3	Dom34/Pelota N-terminal domain-like	Dom34/Pelota N-terminal domain-like
e3wxmB3	B:126-252	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3wxmB2	B:253-355	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3wxmC1	C:4-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3wxmC3	C:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e3wxmC2	C:323-434	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e3wxmD1	D:-1-125	SH3	Dom34/Pelota N-terminal domain-like	Dom34/Pelota N-terminal domain-like
e3wxmD3	D:126-252	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3wxmD2	D:253-355	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3wxmE2	E:3-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3wxmE1	E:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e3wxmE3	E:323-432	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e3wxmF3	F:0-125	SH3	Dom34/Pelota N-terminal domain-like	Dom34/Pelota N-terminal domain-like
e3wxmF1	F:126-252	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3wxmF2	F:253-354	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3wxmG1	G:3-229	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3wxmG3	G:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e3wxmG2	G:323-434	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e3wxmH2	H:-1-125	SH3	Dom34/Pelota N-terminal domain-like	Dom34/Pelota N-terminal domain-like
e3wxmH1	H:126-252	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3wxmH3	H:253-354	Bacillus chorismate mutase-like	L30e-like	L30e-like

Structural contacts of domain e3wxmD3 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3wxmC3	D:x,y,z->C:X,Y,Z	RIFT-related	Interaction Interface Pymol
e3wxmC2	D:x,y,z->C:X,Y,Z	RIFT-related	Interaction Interface Pymol
e3wxmC1	D:x,y,z->C:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e3wxmF1	D:x,y,z->F:X-1/2,-Y+1/2,-Z	Ribonuclease H-like	Interaction Interface Pymol
e3wxmH2	D:x,y,z->H:X-1/2,Y+1/2,Z	Dom34/Pelota N-terminal domain-like	Interaction Interface Pymol