Domain ID e3zeyJ1

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  • A: a+b two layers
  • X: R3H domain-like
  • H: Ribosomal protein S8, N-terminal domain
  • T: Ribosomal protein S8, N-terminal domain
  • F: Ribosomal_S8
UID: 000222664
Type: Automatic domain
Parent: e1i6uA1
Range: J:2-67
PDB: 3zey
PDB Description:
Hsap BLAST neighbor: P62244
Species:

Structure of domain e3zeyJ1

Domains in the same chain:

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e3zeyJ1 J:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3zeyJ2 J:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e3zey02 0:20-115 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e3zey01 0:116-238 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e3zey13 1:9-113 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e3zey12 1:114-172 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3zey11 1:173-256 SH3 SH3 SH3
e3zey21 2:4-190 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3zey31 3:1-250 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3zey42 4:2-110 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3zey41 4:102-193 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e3zey51 5:2-130,5:155-220 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3zey71 7:1-315 beta-propeller-like beta-propeller 7-bladed
e3zey81 8:16-57 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3zey91 9:88-153 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zeyD1 D:1-104 HTH HTH winged
e3zeyF1 F:24-144 Bacillus chorismate mutase-like L30e-like L30e-like
e3zeyG2 G:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e3zeyG1 G:83-142 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3zeyH1 H:7-132 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3zeyJ1 J:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3zeyJ2 J:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3zeyL1 L:2-128 HTH HTH FF domain
e3zeyO1 O:19-167 HTH HTH winged
e3zeyP2 P:186-263 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3zeyQ1 Q:12-116 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3zeyS1 S:2-143 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3zeyT1 T:7-137 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3zeyU2 U:49-112 HTH HTH winged
e3zeyV1 V:2-102 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3zeyW1 W:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zeyX2 X:3-90 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3zeyX1 X:92-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3zeyZ1 Z:36-103 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Structural contacts of domain e3zeyJ1 of H-group "Ribosomal protein S8, N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zeyP2 J:x,y,z->P:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3zey41 J:X,Y,Z->4:x,y,z 40S ribosomal protein S7-A Interaction Interface Pymol
e3zeyW1 J:x,y,z->W:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e3zeyG2 J:X,Y,Z->G:x,y,z 40S ribosomal protein S13 N-terminal domain Interaction Interface Pymol