Domain ID e3zgzD4

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  • A: a+b two layers
  • X: beta-Grasp
  • H: beta-grasp fold domain in leucine-tRNA ligase
  • T: beta-grasp fold domain in leucine-tRNA ligase
  • F: Unmapped domains
UID: 001762460
Type: Automatic domain
Parent: e5ah5A4
Range: D:797-860
PDB: 3zgz
PDB Description: LEUCINE--TRNA LIGASE
UniProt: P07813
Species: Escherichia coli

Structure of domain e3zgzD4

Domains in the same chain:

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e3zgzD5 D:-8-148,D:490-566 HUP domain-like HUP domains HUP domains
e3zgzD7 D:148-225 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zgzD2 D:226-416 cradle loop barrel RIFT-related acid protease
e3zgzD8 D:416-489 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zgzD9 D:569-618 Rubredoxin-like Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)
e3zgzD6 D:619-796 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e3zgzD4 D:797-860 beta-Grasp beta-grasp fold domain in leucine-tRNA ligase beta-grasp fold domain in leucine-tRNA ligase

Domains in the same PDB:

e3zgzA8 A:1-148,A:490-568 HUP domain-like HUP domains HUP domains
e3zgzA2 A:148-225 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zgzA4 A:226-415 cradle loop barrel RIFT-related acid protease
e3zgzA6 A:416-489 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zgzA5 A:570-618 Rubredoxin-like Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)
e3zgzA7 A:619-796 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e3zgzA1 A:797-860 beta-Grasp beta-grasp fold domain in leucine-tRNA ligase beta-grasp fold domain in leucine-tRNA ligase
e3zgzD5 D:-8-148,D:490-566 HUP domain-like HUP domains HUP domains
e3zgzD7 D:148-225 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zgzD2 D:226-416 cradle loop barrel RIFT-related acid protease
e3zgzD8 D:416-489 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3zgzD9 D:569-618 Rubredoxin-like Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)
e3zgzD6 D:619-796 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
e3zgzD4 D:797-860 beta-Grasp beta-grasp fold domain in leucine-tRNA ligase beta-grasp fold domain in leucine-tRNA ligase

Structural contacts of domain e3zgzD4 of H-group "beta-grasp fold domain in leucine-tRNA ligase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zgzD2 D:x,y,z->D:X-1/2,Y-1/2,Z RIFT-related Interaction Interface Pymol
e3zgzD2 D:x,y,z->D:X-1/2,Y-1/2,Z RIFT-related Interaction Interface Pymol