ECOD: domain e3zliB1

Domain ID e3zliB1

A: beta sandwiches
X: jelly-roll
H: Double-stranded beta-helix
T: Double-stranded beta-helix
F: JmjC

UID:	001414646
Type:	Automatic domain
Parent:	e2xueA1
Range:	B:881-995,B:1028-1190
Ligands:	AKG EDO
PDB:	3zli
PDB Description:	HISTONE DEMETHYLASE UTY
UniProt:	O14607
Hsap BLAST neighbor:	O14607
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3zliB1

Domains in the same chain:

Download Pymol

e3zliB1	B:881-995,B:1028-1190	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3zliB3	B:1191-1261,B:1326-1345	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e3zliB2	B:1262-1325	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Domains in the same PDB:

e3zliA1	A:880-995,A:1028-1190	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3zliA3	A:1191-1261,A:1326-1345	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e3zliA2	A:1262-1325	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3zliB1	B:881-995,B:1028-1190	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3zliB3	B:1191-1261,B:1326-1345	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e3zliB2	B:1262-1325	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Structural contacts of domain e3zliB1 of H-group "Double-stranded beta-helix":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3zliA1	B:x,y,z->A:X,Y,Z	Double-stranded beta-helix	Interaction Interface Pymol
e3zliA1	B:x,y,z->A:X-1/2,-Y-1/2,-Z	Double-stranded beta-helix	Interaction Interface Pymol
e3zliA2	B:x,y,z->A:-X,Y-1/2,-Z+1/2	LIM domain-like	Interaction Interface Pymol
e3zliA1	B:x,y,z->A:-X-1,Y-1/2,-Z+1/2	Double-stranded beta-helix	Interaction Interface Pymol
e3zliB1	B:x,y,z->B:-X-1,Y-1/2,-Z+1/2	Double-stranded beta-helix	Interaction Interface Pymol
e3zliB1	B:-X-1,Y-1/2,-Z+1/2->B:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol