| UID: | 001064591 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1e8cA2 |
| Range: | A:297-454 |
| Ligands: | 2GN |
| PDB: | 3zm6 |
| PDB Description: | UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE |
| UniProt: | Q8DNV6 |
| Species: |
Structure of domain e3zm6A2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3zm6A2 of H-group "MurD-like peptide ligases, peptide-binding domain":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3zm6A1 | A:x,y,z->A:Y,X,-Z+1/3 | P-loop domains-related | Interaction Interface Pymol |
| e3zm6A2 | A:x,y,z->A:Y,X,-Z+1/3 | MurD-like peptide ligases, peptide-binding domain | Interaction Interface Pymol |
| e3zm6A1 | A:Y,X,-Z+1/3->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3zm6A2 | A:Y,X,-Z+1/3->A:x,y,z | MurD-like peptide ligases, peptide-binding domain | Interaction Interface Pymol |
| e3zm6A3 | A:x,y,z->A:-Y+1,-X+1,-Z-1/6 | MurF and HprK N-domain-like | Interaction Interface Pymol |
| e3zm6A2 | A:x,y,z->A:-Y+1,-X+1,-Z-1/6 | MurD-like peptide ligases, peptide-binding domain | Interaction Interface Pymol |
| e3zm6A2 | A:-Y+1,-X+1,-Z-1/6->A:x,y,z | MurD-like peptide ligases, peptide-binding domain | Interaction Interface Pymol |
| e3zm6A3 | A:-Y+1,-X+1,-Z-1/6->A:x,y,z | MurF and HprK N-domain-like | Interaction Interface Pymol |
| e3zm6A1 | A:X-Y,-Y+1,-Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3zm6A1 | A:X-Y,X,Z+1/6->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
