Domain ID e3zvoH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000144765
Type: Automatic domain
Parent: e1seiA2
Range: H:67-138
PDB: 3zvo
PDB Description:
Species:

Structure of domain e3zvoH2

Domains in the same chain:

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e3zvoH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3zvoH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e3zvoC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3zvoC1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3zvoE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3zvoE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3zvoF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3zvoG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3zvoH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3zvoH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3zvoJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3zvoK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3zvoL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3zvoN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3zvoO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3zvoP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3zvoR1 R:19-88 HTH HTH tri-helical
e3zvoT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3zvoY10 Y:3-38,Y:62-280 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3zvoY12 Y:281-390 cradle loop barrel RIFT-related Alanine racemase-C
e3zvoY11 Y:391-529 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e3zvoH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zvoE2 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol