Domain ID e4a1aD1

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  • A: a+b two layers
  • X: Ribosomal protein L5
  • H: Ribosomal protein L5
  • T: Ribosomal protein L5
  • F: Ribosomal_L5,Ribosomal_L5_C
UID: 000434165
Type: Automatic domain
Parent: e1iq4A1
Range: D:4-172
PDB: 4a1a
PDB Description:
Hsap BLAST neighbor: P62913
Species:

Structure of domain e4a1aD1

Domains in the same chain:

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e4a1aD1 D:4-172 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5

Domains in the same PDB:

e4a1aB1 B:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4a1aC1 C:1-46,C:120-270 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4a1aD1 D:4-172 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4a1aE1 E:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4a1aE3 E:86-186 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4a1aF2 F:19-249 Bacillus chorismate mutase-like L30e-like L30e-like
e4a1aH1 H:2-213 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4a1aI1 I:1-198 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4a1aJ1 J:4-141 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4a1aL1 L:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4a1aM2 M:2-301 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4a1aN1 N:2-181 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4a1aO2 O:2-57 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4a1aO3 O:58-147 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4a1aP1 P:2-98 SH3 SH3 SH3
e4a1aQ1 Q:2-158 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4a1aR1 R:30-150 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4a1aS1 S:2-127 SH3 SH3 SH3
e4a1aT1 T:2-62 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4a1aU1 U:2-124 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4a1aV3 V:6-239 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4a1aW1 W:2-111 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4a1aX1 X:3-127 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4a1aY2 Y:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e4a1aD1 of H-group "Ribosomal protein L5":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4a1aM2 D:X,Y,Z->M:x,y,z Ribonuclease H-like Interaction Interface Pymol