Domain ID e4a1cB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 000434203
Type: Automatic domain
Parent: e1vqoB1
Range: B:2-387
PDB: 4a1c
PDB Description:
Hsap BLAST neighbor: P39023
Species:

Structure of domain e4a1cB1

Domains in the same chain:

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e4a1cB1 B:2-387 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e4a1cB1 B:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4a1cC1 C:1-46,C:120-270 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4a1cD1 D:4-172 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4a1cE1 E:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4a1cE3 E:86-186 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4a1cF2 F:19-249 Bacillus chorismate mutase-like L30e-like L30e-like
e4a1cH1 H:2-213 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4a1cI1 I:1-198 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4a1cJ1 J:4-141 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4a1cL1 L:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4a1cM3 M:2-301 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4a1cN1 N:2-181 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4a1cO2 O:2-57 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4a1cO3 O:58-154 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4a1cP1 P:1-97 SH3 SH3 SH3
e4a1cQ1 Q:2-158 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4a1cR1 R:30-150 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4a1cS1 S:2-127 SH3 SH3 SH3
e4a1cT1 T:2-62 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4a1cU1 U:2-124 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4a1cV3 V:6-239 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4a1cW1 W:2-111 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4a1cX1 X:3-127 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4a1cY2 Y:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e4a1cB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4a1cT1 B:X,Y,Z->T:x,y,z LIM domain-like Interaction Interface Pymol
e4a1cJ1 B:X,Y,Z->J:x,y,z Ribosomal protein L14-related Interaction Interface Pymol
e4a1cI1 B:X,Y,Z->I:x,y,z Ribosomal protein L13 and L16-A Interaction Interface Pymol