Domain ID e4a1iC1

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  • A: beta complex topology
  • X: L,D-transpeptidase catalytic domain-like
  • H: L,D-transpeptidase catalytic domain-like
  • T: L,D-transpeptidase catalytic domain-like
  • F: YkuD
UID: 000975124
Type: Automatic domain
Parent: e1zatA1
Range: C:49-164
Ligands: CD CL SO4
PDB: 4a1i
PDB Description: PUTATIVE L, D-TRANSPEPTIDASE YKUD
UniProt: O34816
Species: Bacillus subtilis

Structure of domain e4a1iC1

Domains in the same chain:

e4a1iC2 C:0-48 HTH LysM domain LysM domain
e4a1iC1 C:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like

Domains in the same PDB:

e4a1iA2 A:0-48 HTH LysM domain LysM domain
e4a1iA1 A:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iB2 B:0-48 HTH LysM domain LysM domain
e4a1iB1 B:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iC2 C:0-48 HTH LysM domain LysM domain
e4a1iC1 C:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iD2 D:0-48 HTH LysM domain LysM domain
e4a1iD1 D:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iE2 E:0-48 HTH LysM domain LysM domain
e4a1iE1 E:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iF2 F:0-48 HTH LysM domain LysM domain
e4a1iF1 F:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iG2 G:0-48 HTH LysM domain LysM domain
e4a1iG1 G:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iH2 H:0-48 HTH LysM domain LysM domain
e4a1iH1 H:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like

Structural contacts of domain e4a1iC1 of H-group "L,D-transpeptidase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4a1iG2 C:X,Y,Z->G:x,y,z LysM domain Interaction Interface Pymol
e4a1iG1 C:X,Y,Z->G:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iF2 C:X,Y,Z->F:x,y,z LysM domain Interaction Interface Pymol
e4a1iF1 C:X,Y,Z->F:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iA1 C:x,y,z->A:X,Y,Z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iA2 C:x,y,z->A:X,Y,Z LysM domain Interaction Interface Pymol
e4a1iB2 C:-X+1,Y-1/2,-Z+1->B:x,y,z LysM domain Interaction Interface Pymol
e4a1iD1 C:-X+1,Y-1/2,-Z->D:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iE1 C:X,Y,Z->E:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol