Domain ID e4a1iD2

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  • A: alpha arrays
  • X: HTH
  • H: LysM domain
  • T: LysM domain
  • F: LysM
UID: 000975121
Type: Automatic domain
Parent: e1y7mA2
Range: D:0-48
Ligands: SO4
PDB: 4a1i
PDB Description: PUTATIVE L, D-TRANSPEPTIDASE YKUD
UniProt: O34816
Species: Bacillus subtilis

Structure of domain e4a1iD2

Domains in the same chain:

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e4a1iD2 D:0-48 HTH LysM domain LysM domain
e4a1iD1 D:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like

Domains in the same PDB:

e4a1iA2 A:0-48 HTH LysM domain LysM domain
e4a1iA1 A:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iB2 B:0-48 HTH LysM domain LysM domain
e4a1iB1 B:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iC2 C:0-48 HTH LysM domain LysM domain
e4a1iC1 C:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iD2 D:0-48 HTH LysM domain LysM domain
e4a1iD1 D:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iE2 E:0-48 HTH LysM domain LysM domain
e4a1iE1 E:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iF2 F:0-48 HTH LysM domain LysM domain
e4a1iF1 F:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iG2 G:0-48 HTH LysM domain LysM domain
e4a1iG1 G:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like
e4a1iH2 H:0-48 HTH LysM domain LysM domain
e4a1iH1 H:49-164 L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like L,D-transpeptidase catalytic domain-like

Structural contacts of domain e4a1iD2 of H-group "LysM domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4a1iH1 D:X-1,Y,Z->H:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iE2 D:X,Y,Z->E:x,y,z LysM domain Interaction Interface Pymol
e4a1iE1 D:X,Y,Z->E:x,y,z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iE1 D:x,y,z->E:-X+1,Y-1/2,-Z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol
e4a1iH2 D:X,Y,Z->H:x,y,z LysM domain Interaction Interface Pymol
e4a1iA1 D:x,y,z->A:X,Y,Z L,D-transpeptidase catalytic domain-like Interaction Interface Pymol