ECOD: domain e4acbA8

Domain ID e4acbA8

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2

UID:	001166980
Type:	Automatic domain
Parent:	e2c78A1
Range:	A:177-271
Ligands:	5GP
PDB:	4acb
PDB Description:	TRANSLATION ELONGATION FACTOR SELB
UniProt:	Q8J307
Hsap BLAST neighbor:	P57772
Species:	Methanococcus maripaludis

Domains in the same chain:

Download Pymol

e4acbA10	A:0-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4acbA8	A:177-271	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbA2	A:272-387	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4acbA4	A:388-468	cradle loop barrel	RIFT-related	Alanine racemase-C

Domains in the same PDB:

e4acbA10	A:0-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4acbA8	A:177-271	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbA2	A:272-387	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4acbA4	A:388-468	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbB10	B:1-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4acbB8	B:177-271	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbB2	B:272-387	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4acbB4	B:388-468	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbC10	C:-2-173	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4acbC8	C:174-271	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbC2	C:272-387	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4acbC4	C:388-468	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbD10	D:2-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4acbD8	D:177-271	cradle loop barrel	RIFT-related	Alanine racemase-C
e4acbD2	D:272-387	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e4acbD4	D:388-468	cradle loop barrel	RIFT-related	Alanine racemase-C

Structural contacts of domain e4acbA8 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4acbA8	A:x,y,z->A:-Y,-X,-Z-1/3	RIFT-related	Interaction Interface Pymol
e4acbA8	A:-Y,-X,-Z-1/3->A:x,y,z	RIFT-related	Interaction Interface Pymol
e4acbB2	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e4acbB10	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol