ECOD: domain e4akgA5

Domain ID e4akgA5

A: alpha arrays
X: Histone-like
H: Histone-related
T: AAA+ ATPase lid domain
F: AAA_lid_11

UID:	001700499
Type:	Automatic domain
Parent:	e3j67A12
Range:	A:3901-4092
PDB:	4akg
PDB Description:	GLUTATHIONE S-TRANSFERASE CLASS-MU 26 KDA ISOZYME, DYNEIN HEAVY CHAIN CYTOPLASMIC
UniProt:	P36022
Hsap BLAST neighbor:	Q14204
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e4akgA15	A:1-79	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e4akgA10	A:80-219	Repetitive alpha hairpins	Glutathione S-transferase (GST)-C	Glutathione S-transferase (GST)-C
e4akgA1	A:1365-1760	Linker domain of cytoplasmic dynein heavy chain	Linker domain of cytoplasmic dynein heavy chain	Linker domain of cytoplasmic dynein heavy chain
e4akgA8	A:1761-1927	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA14	A:1928-2027	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA6	A:2028-2217	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA9	A:2218-2377	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA7	A:2378-2564	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA11	A:2565-2692	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA3	A:2691-2922	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA4	A:2923-3402	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA13	A:3403-3520	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA2	A:3521-3776	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA12	A:3773-3900	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA5	A:3901-4092	Histone-like	Histone-related	AAA+ ATPase lid domain

Domains in the same PDB:

e4akgA15	A:1-79	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e4akgA10	A:80-219	Repetitive alpha hairpins	Glutathione S-transferase (GST)-C	Glutathione S-transferase (GST)-C
e4akgA1	A:1365-1760	Linker domain of cytoplasmic dynein heavy chain	Linker domain of cytoplasmic dynein heavy chain	Linker domain of cytoplasmic dynein heavy chain
e4akgA8	A:1761-1927	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA14	A:1928-2027	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA6	A:2028-2217	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA9	A:2218-2377	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA7	A:2378-2564	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA11	A:2565-2692	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA3	A:2691-2922	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA4	A:2923-3402	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA13	A:3403-3520	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA2	A:3521-3776	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgA12	A:3773-3900	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgA5	A:3901-4092	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgB15	B:1-79	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e4akgB10	B:80-219	Repetitive alpha hairpins	Glutathione S-transferase (GST)-C	Glutathione S-transferase (GST)-C
e4akgB1	B:1365-1760	Linker domain of cytoplasmic dynein heavy chain	Linker domain of cytoplasmic dynein heavy chain	Linker domain of cytoplasmic dynein heavy chain
e4akgB8	B:1761-1927	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgB14	B:1928-2027	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgB6	B:2028-2217	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgB9	B:2218-2377	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgB7	B:2378-2564	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgB11	B:2565-2692	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgB3	B:2691-2922	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgB4	B:2923-3402	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgB13	B:3403-3520	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgB2	B:3521-3776	Histone-like	Histone-related	AAA+ ATPase lid domain
e4akgB12	B:3773-3900	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4akgB5	B:3901-4092	Histone-like	Histone-related	AAA+ ATPase lid domain

Structural contacts of domain e4akgA5 of H-group "Histone-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4akgA6	A:x,y,z->A:-X+1,Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e4akgB6	A:x,y,z->B:-X+1,Y-1/2,-Z+1	P-loop domains-related	Interaction Interface Pymol
e4akgB7	A:x,y,z->B:-X+1,Y-1/2,-Z+1	P-loop domains-related	Interaction Interface Pymol