Domain ID e4akgA6

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: AAA_5
UID: 001704965
Type: Automatic domain
Parent: e4ai6A6
Range: A:2028-2217
Ligands: ATP MG
PDB: 4akg
PDB Description: GLUTATHIONE S-TRANSFERASE CLASS-MU 26 KDA ISOZYME, DYNEIN HEAVY CHAIN CYTOPLASMIC
UniProt: P36022
Hsap BLAST neighbor: Q14204
Species: Saccharomyces cerevisiae

Structure of domain e4akgA6

Domains in the same chain:

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e4akgA15 A:1-79 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e4akgA10 A:80-219 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C
e4akgA1 A:1365-1760 Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain
e4akgA8 A:1761-1927 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA14 A:1928-2027 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA6 A:2028-2217 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA9 A:2218-2377 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA7 A:2378-2564 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA11 A:2565-2692 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA3 A:2691-2922 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA4 A:2923-3402 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA13 A:3403-3520 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA2 A:3521-3776 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA12 A:3773-3900 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA5 A:3901-4092 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e4akgA15 A:1-79 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e4akgA10 A:80-219 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C
e4akgA1 A:1365-1760 Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain
e4akgA8 A:1761-1927 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA14 A:1928-2027 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA6 A:2028-2217 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA9 A:2218-2377 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA7 A:2378-2564 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA11 A:2565-2692 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA3 A:2691-2922 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA4 A:2923-3402 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA13 A:3403-3520 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA2 A:3521-3776 Histone-like Histone-related AAA+ ATPase lid domain
e4akgA12 A:3773-3900 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgA5 A:3901-4092 Histone-like Histone-related AAA+ ATPase lid domain
e4akgB15 B:1-79 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e4akgB10 B:80-219 Repetitive alpha hairpins Glutathione S-transferase (GST)-C Glutathione S-transferase (GST)-C
e4akgB1 B:1365-1760 Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain Linker domain of cytoplasmic dynein heavy chain
e4akgB8 B:1761-1927 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgB14 B:1928-2027 Histone-like Histone-related AAA+ ATPase lid domain
e4akgB6 B:2028-2217 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgB9 B:2218-2377 Histone-like Histone-related AAA+ ATPase lid domain
e4akgB7 B:2378-2564 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgB11 B:2565-2692 Histone-like Histone-related AAA+ ATPase lid domain
e4akgB3 B:2691-2922 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgB4 B:2923-3402 Histone-like Histone-related AAA+ ATPase lid domain
e4akgB13 B:3403-3520 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgB2 B:3521-3776 Histone-like Histone-related AAA+ ATPase lid domain
e4akgB12 B:3773-3900 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4akgB5 B:3901-4092 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e4akgA6 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4akgA5 A:-X+1,Y-1/2,-Z->A:x,y,z Histone-related Interaction Interface Pymol
e4akgA1 A:-X+1,Y-1/2,-Z->A:x,y,z Linker domain of cytoplasmic dynein heavy chain Interaction Interface Pymol