Domain ID e4apbD9

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  • A: alpha arrays
  • X: L-aspartase N-terminal domain-like
  • H: L-aspartase N-terminal domain-like
  • T: L-aspartase N-terminal domain-like
  • F: Lyase_1
UID: 001153008
Type: Automatic domain
Parent: e1vdkA3
Range: D:9-137
Ligands: FUM
PDB: 4apb
PDB Description: FUMARATE HYDRATASE CLASS II
UniProt: P9WN93
Hsap BLAST neighbor: P07954
Species:

Structure of domain e4apbD9

Domains in the same chain:

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e4apbD9 D:9-137 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4apbD8 D:138-393 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4apbD7 D:394-470 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e4apbA9 A:9-137 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4apbA8 A:138-393 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4apbA7 A:394-468 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e4apbB9 B:9-137 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4apbB8 B:138-393 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4apbB7 B:394-468 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e4apbC9 C:9-137 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4apbC8 C:138-393 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4apbC7 C:394-468 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e4apbD9 D:9-137 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e4apbD8 D:138-393 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e4apbD7 D:394-470 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e4apbD9 of H-group "L-aspartase N-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4apbC7 D:x,y,z->C:X,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e4apbC8 D:x,y,z->C:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e4apbB8 D:x,y,z->B:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e4apbD7 D:x,y,z->D:X,Y-1,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e4apbC9 D:x,y,z->C:X,Y-1,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e4apbB7 D:x,y,z->B:X-1/2,-Y-1/2,-Z L-aspartase C-terminal domain-like Interaction Interface Pymol