Domain ID e4b4tV1

Download files:
  • A: a+b three layers
  • X: Cytidine deaminase-like
  • H: Cytidine deaminase-like
  • T: Cytidine deaminase-like
  • F: JAB
UID: 001390544
Type: Automatic domain
Parent: e4cr2U2
Range: V:17-173,V:196-219
PDB: 4b4t
PDB Description:
Hsap BLAST neighbor: O00487
Species:

Structure of domain e4b4tV1

Domains in the same chain:

Download Pymol

e4b4tV1 V:17-173,V:196-219 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like

Domains in the same PDB:

e4b4t11 1:-9-196 Ntn/PP2C Ntn Proteasome subunits
e4b4t21 2:1-222 Ntn/PP2C Ntn Proteasome subunits
e4b4t31 3:-9-196 Ntn/PP2C Ntn Proteasome subunits
e4b4t41 4:-1-197 Ntn/PP2C Ntn Proteasome subunits
e4b4t51 5:1-212 Ntn/PP2C Ntn Proteasome subunits
e4b4t62 6:-9-213 Ntn/PP2C Ntn Proteasome subunits
e4b4t71 7:-8-225 Ntn/PP2C Ntn Proteasome subunits
e4b4tA1 A:1-252 Ntn/PP2C Ntn Proteasome subunits
e4b4tB1 B:1-250 Ntn/PP2C Ntn Proteasome subunits
e4b4tC1 C:1-245 Ntn/PP2C Ntn Proteasome subunits
e4b4tD1 D:1-243 Ntn/PP2C Ntn Proteasome subunits
e4b4tE1 E:1-249 Ntn/PP2C Ntn Proteasome subunits
e4b4tF1 F:1-234 Ntn/PP2C Ntn Proteasome subunits
e4b4tG1 G:4-247 Ntn/PP2C Ntn Proteasome subunits
e4b4tH1 H:191-377 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4b4tH3 H:378-456 Histone-like Histone-related AAA+ ATPase lid domain
e4b4tI3 I:75-163 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4b4tI1 I:164-351 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4b4tI2 I:352-437 Histone-like Histone-related AAA+ ATPase lid domain
e4b4tJ1 J:132-319 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4b4tJ2 J:319-396 Histone-like Histone-related AAA+ ATPase lid domain
e4b4tK1 K:155-341 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4b4tL1 L:164-352 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4b4tL3 L:352-427 Histone-like Histone-related AAA+ ATPase lid domain
e4b4tM1 M:166-352 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4b4tM3 M:352-434 Histone-like Histone-related AAA+ ATPase lid domain
e4b4tN4 N:4-306 Repetitive alpha hairpins 26S proteasome subunit Rpn2 N-terminal domain 26S proteasome subunit Rpn2 N-terminal domain
e4b4tN3 N:307-754 Repetitive alpha hairpins Proteasome/cyclosome (PC) repeat Proteasome/cyclosome (PC) repeat
e4b4tN2 N:755-787,N:860-925 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain
e4b4tO2 O:1-278 Repetitive alpha hairpins ARM repeat ARM repeat
e4b4tO1 O:279-350 HTH HTH winged
e4b4tP2 P:28-337 Repetitive alpha hairpins ARM repeat ARM repeat
e4b4tP1 P:338-402 HTH HTH winged
e4b4tQ1 Q:1-325 Repetitive alpha hairpins ARM repeat ARM repeat
e4b4tQ2 Q:326-400 HTH HTH winged
e4b4tR3 R:42-319 Repetitive alpha hairpins ARM repeat ARM repeat
e4b4tR4 R:320-392 HTH HTH winged
e4b4tS4 S:203-380 Repetitive alpha hairpins ARM repeat ARM repeat
e4b4tS1 S:370-451 HTH HTH winged
e4b4tT1 T:61-183 Repetitive alpha hairpins ARM repeat ARM repeat
e4b4tT2 T:179-235 HTH HTH winged
e4b4tV1 V:17-173,V:196-219 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4b4tW1 W:1-196 HAD domain-like HAD domain-related vWA-like
e4b4tX1 X:7-132 PH domain-like PH domain-like PH domain-like

Structural contacts of domain e4b4tV1 of H-group "Cytidine deaminase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4b4tN3 V:X,Y,Z->N:x,y,z Proteasome/cyclosome (PC) repeat Interaction Interface Pymol
e4b4tW1 V:x,y,z->W:X,Y,Z HAD domain-related Interaction Interface Pymol