| UID: | 000066086 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2hhvA3 |
| Range: | A:643-667,A:792-875 |
| Ligands: | MG SO4 |
| PDB: | 4bdp |
| PDB Description: | PROTEIN (DNA POLYMERASE I) |
| UniProt: | P52026 |
| Hsap BLAST neighbor: | O75417 |
| Species: | Geobacillus stearothermophilus |
Structure of domain e4bdpA3
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e4bdpA3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4bdpA4 | A:-X,Y-1/2,-Z+1/2->A:x,y,z | Ribonuclease H-like | Interaction Interface Pymol |
| e4bdpA1 | A:-X,Y-1/2,-Z+1/2->A:x,y,z | helical bundle in Bacillus stearothermophilus-like DNA polymerase I | Interaction Interface Pymol |
| e4bdpA1 | A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 | helical bundle in Bacillus stearothermophilus-like DNA polymerase I | Interaction Interface Pymol |
| e4bdpA2 | A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 | "fingers" domain in bacteriophage RB69-like DNA polymerase I | Interaction Interface Pymol |
