Domain ID e4bkfA1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Galactose-binding domain-like
  • T: Galactose-binding domain-like
  • F: Ephrin_lbd
UID: 001812227
Type: Automatic domain
Parent: e4bk4A1
Range: A:29-201
PDB: 4bkf
PDB Description: EPHRIN TYPE-A RECEPTOR 4
UniProt: P54764
Hsap BLAST neighbor: P54764
Species: Homo sapiens

Structure of domain e4bkfA1

Domains in the same chain:

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e4bkfA1 A:29-201 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4bkfA5 A:202-260 EGF-like EGF-related Complement control module/SCR domain
e4bkfA4 A:261-327 EGF-like EGF-related EGF/Laminin
e4bkfA2 A:328-437 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfA3 A:438-532 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4bkfA1 A:29-201 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4bkfA5 A:202-260 EGF-like EGF-related Complement control module/SCR domain
e4bkfA4 A:261-327 EGF-like EGF-related EGF/Laminin
e4bkfA2 A:328-437 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfA3 A:438-532 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfB1 B:28-209 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e4bkfB2 B:204-326 EGF-like EGF-related EGF/Laminin
e4bkfB3 B:327-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfB4 B:446-532 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfC1 C:29-169 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e4bkfD1 D:29-169 Cupredoxin-like Cupredoxin-related Cupredoxin-related

Structural contacts of domain e4bkfA1 of H-group "Galactose-binding domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4bkfD1 A:X,Y,Z->D:x,y,z Cupredoxin-related Interaction Interface Pymol
e4bkfB1 A:X,Y,Z->B:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e4bkfC1 A:x,y,z->C:Z,X,Y Cupredoxin-related Interaction Interface Pymol
e4bkfD1 A:-Z+1/4,-Y+1/4,-X+1/4->D:x,y,z Cupredoxin-related Interaction Interface Pymol
e4bkfB1 A:x,y,z->B:Z,X,Y Galactose-binding domain-like Interaction Interface Pymol