ECOD: domain e4bkfD1

Domain ID e4bkfD1

A: beta sandwiches
X: Cupredoxin-like
H: Cupredoxin-related
T: Cupredoxin-related
F: Ephrin

UID:	001064635
Type:	Automatic domain
Parent:	e1ikoP1
Range:	D:29-169
PDB:	4bkf
PDB Description:	EPHRIN-B3
UniProt:	Q15768
Hsap BLAST neighbor:	Q15768
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4bkfD1

Domains in the same chain:

Download Pymol

e4bkfD1	D:29-169	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related

Domains in the same PDB:

e4bkfA1	A:29-201	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e4bkfA5	A:202-260	EGF-like	EGF-related	Complement control module/SCR domain
e4bkfA4	A:261-327	EGF-like	EGF-related	EGF/Laminin
e4bkfA2	A:328-437	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfA3	A:438-532	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfB1	B:28-209	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e4bkfB2	B:204-326	EGF-like	EGF-related	EGF/Laminin
e4bkfB3	B:327-445	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfB4	B:446-532	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4bkfC1	C:29-169	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e4bkfD1	D:29-169	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related

Structural contacts of domain e4bkfD1 of H-group "Cupredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4bkfA1	D:x,y,z->A:X,Y,Z	Galactose-binding domain-like	Interaction Interface Pymol
e4bkfA1	D:x,y,z->A:-Z+1/4,-Y+1/4,-X+1/4	Galactose-binding domain-like	Interaction Interface Pymol
e4bkfC1	D:x,y,z->C:Z,X,Y	Cupredoxin-related	Interaction Interface Pymol
e4bkfD1	D:x,y,z->D:-Z+1/4,-Y+1/4,-X+1/4	Cupredoxin-related	Interaction Interface Pymol
e4bkfD1	D:-Z+1/4,-Y+1/4,-X+1/4->D:x,y,z	Cupredoxin-related	Interaction Interface Pymol
e4bkfB1	D:x,y,z->B:-Z+1/4,-Y+1/4,-X+1/4	Galactose-binding domain-like	Interaction Interface Pymol
e4bkfD1	D:x,y,z->D:-X+1/4,-Z+1/4,-Y+1/4	Cupredoxin-related	Interaction Interface Pymol
e4bkfD1	D:-X+1/4,-Z+1/4,-Y+1/4->D:x,y,z	Cupredoxin-related	Interaction Interface Pymol