ECOD: domain e4bocA4

Domain ID e4bocA4

A: a+b two layers
X: Alpha-beta plaits
H: Adenylyl and guanylyl cyclase catalytic domain-like
T: Adenylyl and guanylyl cyclase catalytic domain-like
F: RNA_pol

UID:	001765005
Type:	Automatic domain
Parent:	e1mswD5
Range:	A:1107-1230
PDB:	4boc
PDB Description:	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL
UniProt:	O00411
Hsap BLAST neighbor:	O00411
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4bocA6	A:218-405	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4bocA7	A:397-643	HTH	HTH	HTH in T7 RNA polymerase
e4bocA5	A:644-829	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e4bocA2	A:830-902	inserted helical bundle subdomain in T7 RNA polymerase	inserted helical bundle subdomain in T7 RNA polymerase	inserted helical bundle subdomain in T7 RNA polymerase
e4bocA1	A:903-1085	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e4bocA4	A:1107-1230	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like

Domains in the same PDB:

e4bocA6	A:218-405	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4bocA7	A:397-643	HTH	HTH	HTH in T7 RNA polymerase
e4bocA5	A:644-829	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e4bocA2	A:830-902	inserted helical bundle subdomain in T7 RNA polymerase	inserted helical bundle subdomain in T7 RNA polymerase	inserted helical bundle subdomain in T7 RNA polymerase
e4bocA1	A:903-1085	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e4bocA4	A:1107-1230	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like

Structural contacts of domain e4bocA4 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4bocA4	A:x,y,z->A:-X,-Y+2,Z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e4bocA4	A:-X,-Y+2,Z->A:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol