| UID: | 001312461 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:1098-1224 |
| Ligands: | ZN |
| PDB: | 4by7 |
| PDB Description: | DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 |
| UniProt: | P08518 |
| Hsap BLAST neighbor: | P30876 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e4by7B7
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e4by7B7 of H-group "C-terminal domain in beta subunit of DNA dependent RNA-polymerase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4by7A3 | B:x,y,z->A:X,Y,Z | central helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e4by7A6 | B:x,y,z->A:X,Y,Z | N-terminal domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e4by7A7 | B:x,y,z->A:X,Y,Z | second helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e4by7A1 | B:x,y,z->A:X,Y,Z | MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | Interaction Interface Pymol |
| e4by7A5 | B:x,y,z->A:X,Y,Z | RIFT-related | Interaction Interface Pymol |
| e4by7K1 | B:X,Y,Z->K:x,y,z | RBP11-like subunits of RNA polymerase | Interaction Interface Pymol |
| e4by7D1 | B:X,Y,Z->D:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e4by7F1 | B:X,Y,Z->F:x,y,z | RPB6/omega subunit-like | Interaction Interface Pymol |
| e4by7G4 | B:X,Y,Z->G:x,y,z | Flavin-binding protein dodecin-like | Interaction Interface Pymol |
| e4by7E1 | B:X,Y,Z->E:x,y,z | RPB5-like RNA polymerase subunit | Interaction Interface Pymol |
