Domain ID e4by9D1

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  • A: a+b three layers
  • X: Bacillus chorismate mutase-like
  • H: L30e-like
  • T: L30e-like
  • F: Ribosomal_L7Ae
UID: 001106964
Type: Automatic domain
Parent: e1xbiA1
Range: D:1-121
PDB: 4by9
PDB Description: 50S RIBOSOMAL PROTEIN L7AE
UniProt: Q8U160
Hsap BLAST neighbor: P55769
Species: Pyrococcus furiosus

Structure of domain e4by9D1

Domains in the same chain:

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e4by9D1 D:1-121 Bacillus chorismate mutase-like L30e-like L30e-like

Domains in the same PDB:

e4by9C3 C:1-119 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9C2 C:120-250 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9C4 C:251-366 HhH/H2TH SAM/DNA-glycosylase Nop C-terminal domain
e4by9D1 D:1-121 Bacillus chorismate mutase-like L30e-like L30e-like
e4by9E1 E:1-227 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e4by9F2 F:1-119 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9F3 F:120-250 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9F4 F:251-366 HhH/H2TH SAM/DNA-glycosylase Nop C-terminal domain
e4by9G1 G:1-121 Bacillus chorismate mutase-like L30e-like L30e-like
e4by9H1 H:1-227 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e4by9I3 I:1-119 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9I2 I:120-250 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9I4 I:251-366 HhH/H2TH SAM/DNA-glycosylase Nop C-terminal domain
e4by9J1 J:1-121 Bacillus chorismate mutase-like L30e-like L30e-like
e4by9K1 K:1-227 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e4by9L2 L:1-119 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9L3 L:120-250 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e4by9L4 L:251-366 HhH/H2TH SAM/DNA-glycosylase Nop C-terminal domain
e4by9M1 M:1-121 Bacillus chorismate mutase-like L30e-like L30e-like
e4by9N1 N:1-227 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e4by9D1 of H-group "L30e-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4by9C4 D:X,Y,Z->C:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e4by9K1 D:x,y,z->K:X,Y,Z Rossmann-related Interaction Interface Pymol