Domain ID e4bytD1

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  • A: a+b two layers
  • X: T-fold
  • H: Ribosomal protein S3-C
  • T: Ribosomal protein S3-C
  • F: Ribosomal_S3_C
UID: 001118008
Type: Automatic domain
Parent: e2uubC1
Range: D:92-225
PDB: 4byt
PDB Description:
Hsap BLAST neighbor: P23396
Species:

Structure of domain e4bytD1

Domains in the same chain:

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e4bytD2 D:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4bytD1 D:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C

Domains in the same PDB:

e4byt01 0:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4byt11 1:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4byt21 2:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4byt31 3:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4byt51 5:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4byt61 6:2-319 beta-propeller-like beta-propeller 7-bladed
e4bytB1 B:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4bytB2 B:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4bytD2 D:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4bytD1 D:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4bytE3 E:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4bytE1 E:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4bytE2 E:176-261 SH3 SH3 SH3
e4bytF1 F:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4bytG1 G:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4bytH2 H:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4bytH1 H:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4bytI1 I:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4bytK1 K:1-96 HTH HTH winged
e4bytM1 M:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4bytN1 N:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4bytN2 N:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4bytO1 O:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4bytT1 T:2-144 HTH HTH winged
e4bytU1 U:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4bytW1 W:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4bytW2 W:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4bytX1 X:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4bytY1 Y:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4bytZ1 Z:36-105 HTH HTH winged

Structural contacts of domain e4bytD1 of H-group "Ribosomal protein S3-C":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4byt61 D:x,y,z->6:X,Y,Z beta-propeller Interaction Interface Pymol