Domain ID e4c12A5

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  • A: a/b three-layered sandwiches
  • X: MurD-like peptide ligases, peptide-binding domain
  • H: MurD-like peptide ligases, peptide-binding domain
  • T: MurD-like peptide ligases, peptide-binding domain
  • F: Mur_ligase_C
UID: 001255281
Type: Automatic domain
Parent: e1e8cA2
Range: A:332-493
Ligands: ADP UML
PDB: 4c12
PDB Description: UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE
UniProt: Q2FZP6
Species: Staphylococcus aureus

Structure of domain e4c12A5

Structural contacts of domain e4c12A5 of H-group "MurD-like peptide ligases, peptide-binding domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4c12A5 A:x,y,z->A:-X+3/2,Y-1/2,-Z+1 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e4c12A4 A:-X+3/2,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol
e4c12A3 A:-X+3/2,Y-1/2,-Z+1->A:x,y,z MurF and HprK N-domain-like Interaction Interface Pymol
e4c12A5 A:-X+3/2,Y-1/2,-Z+1->A:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e4c12A4 A:X,Y-1,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol