Domain ID e4c2mA5

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  • A: a+b complex topology
  • X: second helical domain in RNA-polymerase beta-prime subunit
  • H: second helical domain in RNA-polymerase beta-prime subunit
  • T: second helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
UID: 002418005
Type: Manual domain
Parent: e4c3hA5
Range: A:827-1053
PDB: 4c2m
PDB Description: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190
UniProt: P10964
Hsap BLAST neighbor: O95602
Species: Saccharomyces cerevisiae

Structure of domain e4c2mA5

Domains in the same chain:

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e4c2mA1 A:1-141,A:174-273,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4c2mA2 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e4c2mA3 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e4c2mA4 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4c2mA5 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4c2mA6 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e4c2mA7 A:1181-1234,A:1545-1664 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4c2mA8 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c2mA9 A:1262-1349,A:1361-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e4c2m11 1:27-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c2m21 2:8-115 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e4c2m31 3:25-181 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e4c2mA1 A:1-141,A:174-273,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4c2mA2 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e4c2mA3 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e4c2mA4 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4c2mA5 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4c2mA6 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e4c2mA7 A:1181-1234,A:1545-1664 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4c2mA8 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c2mA9 A:1262-1349,A:1361-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c2mB1 B:8-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4c2mB2 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e4c2mB3 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e4c2mB4 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e4c2mB5 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e4c2mB6 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4c2mB7 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4c2mC1 C:31-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4c2mC2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e4c2mD1 D:12-48,D:80-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4c2mE2 E:4-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e4c2mE1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e4c2mF1 F:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e4c2mG3 G:14-126 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e4c2mG2 G:126-170,G:215-250 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c2mH1 H:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c2mI1 I:2-67 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c2mI2 I:68-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c2mJ1 J:1-69 HTH RPB10 RPB10
e4c2mK1 K:42-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4c2mL1 L:27-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c2mM1 M:8-115 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e4c2mN1 N:24-180 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e4c2mP19 P:1-141,P:174-273,P:312-457 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4c2mP23 P:458-499,P:575-659 cradle loop barrel RIFT-related double psi
e4c2mP24 P:500-574 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e4c2mP22 P:660-820 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4c2mP20 P:821-1047 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4c2mP26 P:1048-1168 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e4c2mP3 P:1169-1214,P:1509-1664 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4c2mP9 P:1215-1262 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c2mP8 P:1262-1395,P:1440-1508 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c2mQ3 Q:8-209,Q:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4c2mQ7 Q:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e4c2mQ1 Q:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e4c2mQ5 Q:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e4c2mQ4 Q:762-798,Q:912-1040 cradle loop barrel RIFT-related double psi
e4c2mQ6 Q:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4c2mQ2 Q:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4c2mR1 R:31-75,R:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4c2mR2 R:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e4c2mS1 S:12-48,S:79-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4c2mT2 T:4-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e4c2mT1 T:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e4c2mU1 U:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e4c2mV1 V:14-126 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e4c2mV2 V:127-176,V:215-250 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c2mW1 W:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c2mX1 X:2-67 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c2mX2 X:68-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c2mY1 Y:1-69 HTH RPB10 RPB10
e4c2mZ1 Z:43-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase