ECOD: domain e4ce4l1

Domain ID e4ce4l1

A: a+b two layers
X: Glucose permease domain IIB-like
H: eIF1-like
T: eIF1-like
F: Img2

UID:	001125246
Type:	Automatic domain
Parent:	e4v1al1
Range:	l:91-166
PDB:	4ce4
PDB Description:	MRPL49
UniProt:	F1RQV0
Hsap BLAST neighbor:	Q13405
Species:

Domains in the same chain:

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e4ce4l1	l:91-166	Glucose permease domain IIB-like	eIF1-like	eIF1-like

Domains in the same PDB:

e4ce401	0:38-135	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e4ce411	1:82-139	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e4ce421	2:86-161	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4ce431	3:65-123	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4ce451	5:79-146	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4ce461	6:13-60	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4ce471	7:53-95	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e4ce481	8:103-162	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e4ce491	9:64-99	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e4ce4b1	b:145-336	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	PEBP-like
e4ce4c1	c:34-61,c:136-325	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	ThrRS/AlaRS editing domain
e4ce4c2	c:62-135	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e4ce4D1	D:75-178	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4ce4D2	D:179-274	SH3	SH3	SH3
e4ce4E1	E:148-355	cradle loop barrel	RIFT-related	Alanine racemase-C
e4ce4F1	F:59-282	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4ce4h1	h:35-233	RNase III catalytic domain-like	RNase III catalytic domain-like	RNase III catalytic domain-like
e4ce4h2	h:234-306	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4ce4i1	i:104-264	Cystatin-like	NTF2-like	NTF2-like
e4ce4I1	I:94-150	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e4ce4l1	l:91-166	Glucose permease domain IIB-like	eIF1-like	eIF1-like
e4ce4N1	N:1-147	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4ce4O1	O:32-145	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4ce4P1	P:9-177	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4ce4Q1	Q:55-208	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4ce4R1	R:9-128	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e4ce4S1	S:79-172	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4ce4T1	T:87-205	SH3	SH3	SH3
e4ce4u1	u:67-163	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like
e4ce4U1	U:10-132	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e4ce4V1	V:99-207	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e4ce4W1	W:70-179	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4ce4X1	X:22-108	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4ce4Y1	Y:53-155	SH3	SH3	SH3

Structural contacts of domain e4ce4l1 of H-group "eIF1-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ce4F1	l:x,y,z->F:X,Y,Z	Ribosomal protein L4	Interaction Interface Pymol
e4ce4F1	l:x,y,z->P:X,Y,Z	Ribosomal protein L4	Interaction Interface Pymol