Domain ID e4ckbA2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: S-adenosyl-L-methionine-dependent methyltransferases
  • F: mRNA_G-N7_MeTrfase
UID: 001283690
Type: Automatic domain
Parent: e1ri5A1
Range: A:521-844
Ligands: SAH
PDB: 4ckb
PDB Description: MRNA-CAPPING ENZYME CATALYTIC SUBUNIT
UniProt: P04298
Hsap BLAST neighbor: O43148
Species: Vaccinia virus

Structure of domain e4ckbA2

Domains in the same chain:

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e4ckbA3 A:1-218 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e4ckbA1 A:219-385 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4ckbA4 A:386-520 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ckbA2 A:521-844 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e4ckbA3 A:1-218 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e4ckbA1 A:219-385 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4ckbA4 A:386-520 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ckbA2 A:521-844 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e4ckbB1 B:1-287 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e4ckbD3 D:1-218 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e4ckbD1 D:219-385 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp ATP-grasp
e4ckbD4 D:386-520 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ckbD2 D:521-844 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e4ckbE1 E:1-287 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e4ckbA2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ckbB1 A:X,Y,Z->B:x,y,z Rossmann-related Interaction Interface Pymol
e4ckbB1 A:x,y,z->B:X,Y,Z-1 Rossmann-related Interaction Interface Pymol
e4ckbB1 A:X-1,Y,Z->B:x,y,z Rossmann-related Interaction Interface Pymol
e4ckbA1 A:X-1,Y,Z-1->A:x,y,z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol