Domain ID e4cr1L1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 001146136
Type: Automatic domain
Parent: e2uubL1
Range: L:5-129
Ligands: MG
PDB: 4cr1
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e4cr1L1

Domains in the same chain:

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e4cr1L1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4cr1C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4cr1C1 C:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4cr1E1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4cr1E2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4cr1F1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4cr1G1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4cr1H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4cr1H2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4cr1J1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4cr1K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4cr1L1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr1N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4cr1O1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4cr1P1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4cr1R1 R:19-88 HTH HTH tri-helical
e4cr1T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4cr1Y16 Y:4-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr1Y17 Y:283-403 cradle loop barrel RIFT-related Alanine racemase-C
e4cr1Y19 Y:404-482 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4cr1Y18 Y:483-599 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4cr1Y20 Y:600-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e4cr1L1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cr1H2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol