ECOD: domain e4cr2Q4

Domain ID e4cr2Q4

A: alpha arrays
X: HTH
H: HTH
T: winged
F: PCI

UID:	001576837
Type:	Automatic domain
Parent:	e1ufmA1
Range:	Q:326-405
PDB:	4cr2
PDB Description:	26S PROTEASOME REGULATORY SUBUNIT RPN6
UniProt:	Q12377
Hsap BLAST neighbor:	O00231
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e4cr2Q1	Q:1-328	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2Q4	Q:326-405	HTH	HTH	winged
e4cr2Q3	Q:405-431	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN6 C-termial helix	26S proteasome regulatory subunit RPN6 C-termial helix

Domains in the same PDB:

e4cr211	1:-9-196	Ntn/PP2C	Ntn	Proteasome subunits
e4cr221	2:1-223	Ntn/PP2C	Ntn	Proteasome subunits
e4cr231	3:-8-196	Ntn/PP2C	Ntn	Proteasome subunits
e4cr241	4:-1-197	Ntn/PP2C	Ntn	Proteasome subunits
e4cr251	5:1-212	Ntn/PP2C	Ntn	Proteasome subunits
e4cr261	6:-9-213	Ntn/PP2C	Ntn	Proteasome subunits
e4cr271	7:-8-225	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2A1	A:10-252	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2B1	B:1-250	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2C1	C:2-246	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2D1	D:3-244	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2E1	E:9-251	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2F1	F:2-234	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2G1	G:4-248	Ntn/PP2C	Ntn	Proteasome subunits
e4cr2H1	H:174-360	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr2H2	H:361-456	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr2I2	I:75-163	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr2I3	I:164-351	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr2I1	I:352-436	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr2J3	J:67-128	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr2J2	J:129-318	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr2J1	J:319-396	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr2K4	K:84-152	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr2K2	K:155-341	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr2K3	K:342-428	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr2L3	L:67-162	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr2L1	L:163-352	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr2L2	L:352-427	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr2M3	M:74-85,M:113-163	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr2M2	M:164-352	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr2M1	M:352-434	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr2N3	N:4-306	Repetitive alpha hairpins	26S proteasome subunit Rpn2 N-terminal domain	26S proteasome subunit Rpn2 N-terminal domain
e4cr2N2	N:307-754	Repetitive alpha hairpins	Proteasome/cyclosome (PC) repeat	Proteasome/cyclosome (PC) repeat
e4cr2N1	N:755-787,N:860-925	26S proteasome subunit Rpn2 C-terminal domain	26S proteasome subunit Rpn2 C-terminal domain	26S proteasome subunit Rpn2 C-terminal domain
e4cr2O1	O:1-278	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2O2	O:279-356	HTH	HTH	winged
e4cr2O3	O:357-387	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4cr2P3	P:28-329	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2P2	P:330-407	HTH	HTH	winged
e4cr2P1	P:408-442	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e4cr2Q1	Q:1-328	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2Q4	Q:326-405	HTH	HTH	winged
e4cr2Q3	Q:405-431	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN6 C-termial helix	26S proteasome regulatory subunit RPN6 C-termial helix
e4cr2R2	R:23-319	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2R3	R:320-396	HTH	HTH	winged
e4cr2R1	R:397-422	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e4cr2S4	S:126-369	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2S2	S:370-452	HTH	HTH	winged
e4cr2S3	S:453-478	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e4cr2T1	T:1-183	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr2T2	T:184-272	HTH	HTH	winged
e4cr2U2	U:5-176	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4cr2U1	U:188-235,U:259-308	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr2V2	V:23-205	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4cr2V1	V:206-298	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr2W1	W:1-197	HAD domain-like	HAD domain-related	vWA-like
e4cr2X1	X:7-133	PH domain-like	PH domain-like	PH domain-like
e4cr2Z2	Z:49-365	Repetitive alpha hairpins	26S proteasome subunit Rpn2 N-terminal domain	26S proteasome subunit Rpn2 N-terminal domain
e4cr2Z1	Z:359-625,Z:736-910	Repetitive alpha hairpins	Proteasome/cyclosome (PC) repeat	Proteasome/cyclosome (PC) repeat

Structural contacts of domain e4cr2Q4 of H-group "HTH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4cr2R2	Q:x,y,z->R:X,Y,Z	ARM repeat	Interaction Interface Pymol
e4cr2R3	Q:x,y,z->R:X,Y,Z	HTH	Interaction Interface Pymol
e4cr2R1	Q:x,y,z->R:X,Y,Z	26S proteasome regulatory subunit RPN7 C-terminal helix	Interaction Interface Pymol
e4cr2P2	Q:X,Y,Z->P:x,y,z	HTH	Interaction Interface Pymol