ECOD: domain e4cr4P3

Domain ID e4cr4P3

A: alpha superhelices
X: Repetitive alpha hairpins
H: ARM repeat
T: ARM repeat
F: PSMD12-CSN4_N

UID:	001397114
Type:	Automatic domain
Parent:	e4d10D1
Range:	P:28-329
PDB:	4cr4
PDB Description:	26S PROTEASOME REGULATORY SUBUNIT RPN5
UniProt:	Q12250
Hsap BLAST neighbor:	O00232
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e4cr4P3	P:28-329	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4P1	P:330-407	HTH	HTH	winged
e4cr4P2	P:408-442	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix

Domains in the same PDB:

e4cr411	1:-9-196	Ntn/PP2C	Ntn	Proteasome subunits
e4cr421	2:1-223	Ntn/PP2C	Ntn	Proteasome subunits
e4cr431	3:-8-196	Ntn/PP2C	Ntn	Proteasome subunits
e4cr441	4:-1-197	Ntn/PP2C	Ntn	Proteasome subunits
e4cr451	5:1-212	Ntn/PP2C	Ntn	Proteasome subunits
e4cr461	6:-9-213	Ntn/PP2C	Ntn	Proteasome subunits
e4cr471	7:-8-225	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4A1	A:10-252	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4B1	B:1-250	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4C1	C:2-246	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4D1	D:3-244	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4E1	E:9-251	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4F1	F:2-234	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4G1	G:4-248	Ntn/PP2C	Ntn	Proteasome subunits
e4cr4H1	H:174-360	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr4H2	H:361-456	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr4I2	I:75-163	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr4I3	I:164-351	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr4I1	I:352-436	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr4J3	J:67-129	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr4J1	J:130-319	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr4J2	J:319-396	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr4K4	K:89-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr4K2	K:155-341	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr4K3	K:342-428	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr4L3	L:67-162	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr4L2	L:163-352	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr4L1	L:352-427	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr4M2	M:74-85,M:113-161	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4cr4M1	M:162-351	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4cr4M3	M:352-434	Histone-like	Histone-related	AAA+ ATPase lid domain
e4cr4N3	N:4-306	Repetitive alpha hairpins	26S proteasome subunit Rpn2 N-terminal domain	26S proteasome subunit Rpn2 N-terminal domain
e4cr4N2	N:307-754	Repetitive alpha hairpins	Proteasome/cyclosome (PC) repeat	Proteasome/cyclosome (PC) repeat
e4cr4N1	N:755-787,N:860-925	26S proteasome subunit Rpn2 C-terminal domain	26S proteasome subunit Rpn2 C-terminal domain	26S proteasome subunit Rpn2 C-terminal domain
e4cr4O1	O:1-278	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4O2	O:279-356	HTH	HTH	winged
e4cr4O3	O:357-387	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e4cr4P3	P:28-329	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4P1	P:330-407	HTH	HTH	winged
e4cr4P2	P:408-442	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e4cr4Q1	Q:1-328	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4Q4	Q:329-405	HTH	HTH	winged
e4cr4Q3	Q:405-431	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN6 C-termial helix	26S proteasome regulatory subunit RPN6 C-termial helix
e4cr4R2	R:23-319	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4R1	R:320-396	HTH	HTH	winged
e4cr4R3	R:397-422	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e4cr4S3	S:126-369	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4S1	S:370-452	HTH	HTH	winged
e4cr4S2	S:453-478	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e4cr4T2	T:1-183	Repetitive alpha hairpins	ARM repeat	ARM repeat
e4cr4T1	T:184-272	HTH	HTH	winged
e4cr4U1	U:5-176	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4cr4U2	U:188-235,U:259-308	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr4V1	V:23-205	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e4cr4V2	V:206-298	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr4W1	W:1-197	HAD domain-like	HAD domain-related	vWA-like
e4cr4X1	X:7-133	PH domain-like	PH domain-like	PH domain-like
e4cr4Z2	Z:49-365	Repetitive alpha hairpins	26S proteasome subunit Rpn2 N-terminal domain	26S proteasome subunit Rpn2 N-terminal domain
e4cr4Z1	Z:359-625,Z:736-910	Repetitive alpha hairpins	Proteasome/cyclosome (PC) repeat	Proteasome/cyclosome (PC) repeat

Structural contacts of domain e4cr4P3 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4cr4O2	P:X,Y,Z->O:x,y,z	HTH	Interaction Interface Pymol
e4cr4A1	P:X,Y,Z->A:x,y,z	Ntn	Interaction Interface Pymol
e4cr4K3	P:X,Y,Z->K:x,y,z	Histone-related	Interaction Interface Pymol