Domain ID e4cr4Q1

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  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: ARM repeat
  • T: ARM repeat
  • F: RPN6_N
UID: 001290328
Type: Automatic domain
Parent: e5a5bQ2
Range: Q:1-328
PDB: 4cr4
PDB Description: 26S PROTEASOME REGULATORY SUBUNIT RPN6
UniProt: Q12377
Hsap BLAST neighbor: O00231
Species: Saccharomyces cerevisiae

Structure of domain e4cr4Q1

Domains in the same chain:

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e4cr4Q1 Q:1-328 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4Q4 Q:329-405 HTH HTH winged
e4cr4Q3 Q:405-431 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN6 C-termial helix 26S proteasome regulatory subunit RPN6 C-termial helix

Domains in the same PDB:

e4cr411 1:-9-196 Ntn/PP2C Ntn Proteasome subunits
e4cr421 2:1-223 Ntn/PP2C Ntn Proteasome subunits
e4cr431 3:-8-196 Ntn/PP2C Ntn Proteasome subunits
e4cr441 4:-1-197 Ntn/PP2C Ntn Proteasome subunits
e4cr451 5:1-212 Ntn/PP2C Ntn Proteasome subunits
e4cr461 6:-9-213 Ntn/PP2C Ntn Proteasome subunits
e4cr471 7:-8-225 Ntn/PP2C Ntn Proteasome subunits
e4cr4A1 A:10-252 Ntn/PP2C Ntn Proteasome subunits
e4cr4B1 B:1-250 Ntn/PP2C Ntn Proteasome subunits
e4cr4C1 C:2-246 Ntn/PP2C Ntn Proteasome subunits
e4cr4D1 D:3-244 Ntn/PP2C Ntn Proteasome subunits
e4cr4E1 E:9-251 Ntn/PP2C Ntn Proteasome subunits
e4cr4F1 F:2-234 Ntn/PP2C Ntn Proteasome subunits
e4cr4G1 G:4-248 Ntn/PP2C Ntn Proteasome subunits
e4cr4H1 H:174-360 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr4H2 H:361-456 Histone-like Histone-related AAA+ ATPase lid domain
e4cr4I2 I:75-163 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr4I3 I:164-351 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr4I1 I:352-436 Histone-like Histone-related AAA+ ATPase lid domain
e4cr4J3 J:67-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr4J1 J:130-319 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr4J2 J:319-396 Histone-like Histone-related AAA+ ATPase lid domain
e4cr4K4 K:89-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr4K2 K:155-341 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr4K3 K:342-428 Histone-like Histone-related AAA+ ATPase lid domain
e4cr4L3 L:67-162 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr4L2 L:163-352 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr4L1 L:352-427 Histone-like Histone-related AAA+ ATPase lid domain
e4cr4M2 M:74-85,M:113-161 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cr4M1 M:162-351 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4cr4M3 M:352-434 Histone-like Histone-related AAA+ ATPase lid domain
e4cr4N3 N:4-306 Repetitive alpha hairpins 26S proteasome subunit Rpn2 N-terminal domain 26S proteasome subunit Rpn2 N-terminal domain
e4cr4N2 N:307-754 Repetitive alpha hairpins Proteasome/cyclosome (PC) repeat Proteasome/cyclosome (PC) repeat
e4cr4N1 N:755-787,N:860-925 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain 26S proteasome subunit Rpn2 C-terminal domain
e4cr4O1 O:1-278 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4O2 O:279-356 HTH HTH winged
e4cr4O3 O:357-387 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN9 C-terminal helix 26S proteasome regulatory subunit RPN9 C-terminal helix
e4cr4P3 P:28-329 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4P1 P:330-407 HTH HTH winged
e4cr4P2 P:408-442 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN5 C-terminal helix 26S proteasome regulatory subunit RPN5 C-terminal helix
e4cr4Q1 Q:1-328 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4Q4 Q:329-405 HTH HTH winged
e4cr4Q3 Q:405-431 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN6 C-termial helix 26S proteasome regulatory subunit RPN6 C-termial helix
e4cr4R2 R:23-319 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4R1 R:320-396 HTH HTH winged
e4cr4R3 R:397-422 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN7 C-terminal helix 26S proteasome regulatory subunit RPN7 C-terminal helix
e4cr4S3 S:126-369 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4S1 S:370-452 HTH HTH winged
e4cr4S2 S:453-478 26S proteasome regulatory subunits C-terminal helices 26S proteasome regulatory subunit RPN3 C-terminal helix 26S proteasome regulatory subunit RPN3 C-terminal helix
e4cr4T2 T:1-183 Repetitive alpha hairpins ARM repeat ARM repeat
e4cr4T1 T:184-272 HTH HTH winged
e4cr4U1 U:5-176 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4cr4U2 U:188-235,U:259-308 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr4V1 V:23-205 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e4cr4V2 V:206-298 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e4cr4W1 W:1-197 HAD domain-like HAD domain-related vWA-like
e4cr4X1 X:7-133 PH domain-like PH domain-like PH domain-like
e4cr4Z2 Z:49-365 Repetitive alpha hairpins 26S proteasome subunit Rpn2 N-terminal domain 26S proteasome subunit Rpn2 N-terminal domain
e4cr4Z1 Z:359-625,Z:736-910 Repetitive alpha hairpins Proteasome/cyclosome (PC) repeat Proteasome/cyclosome (PC) repeat

Structural contacts of domain e4cr4Q1 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cr4R2 Q:x,y,z->R:X,Y,Z ARM repeat Interaction Interface Pymol
e4cr4K2 Q:X,Y,Z->K:x,y,z P-loop domains-related Interaction Interface Pymol
e4cr4K3 Q:X,Y,Z->K:x,y,z Histone-related Interaction Interface Pymol
e4cr4J2 Q:X,Y,Z->J:x,y,z Histone-related Interaction Interface Pymol
e4cr4B1 Q:X,Y,Z->B:x,y,z Ntn Interaction Interface Pymol