Domain ID e4cuya1

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S26e
UID: 001291957
Type: Manual and representative domain
Range: a:2-98
PDB: 4cuy
PDB Description:
Hsap BLAST neighbor: P62854
Species:

Structure of domain e4cuya1

Domains in the same chain:

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e4cuya1 a:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e4cuya1 a:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4cuyb1 b:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4cuyB2 B:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4cuyB1 B:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4cuyc1 c:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cuyd1 d:5-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4cuyD1 D:4-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4cuyD2 D:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4cuyE3 E:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4cuyE2 E:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cuyE1 E:176-261 SH3 SH3 SH3
e4cuyf1 f:89-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4cuyF1 F:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4cuyg1 g:4-318 beta-propeller-like beta-propeller 7-bladed
e4cuyG1 G:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4cuyH1 H:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4cuyH2 H:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4cuyI1 I:2-199 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4cuyK1 K:1-93 HTH HTH winged
e4cuyM1 M:24-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4cuyN1 N:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4cuyN2 N:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4cuyO1 O:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4cuyT1 T:3-144 HTH HTH winged
e4cuyU1 U:17-120 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4cuyW2 W:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4cuyW1 W:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4cuyX1 X:2-143 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4cuyY1 Y:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4cuyZ1 Z:42-105 HTH HTH winged

Structural contacts of domain e4cuya1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cuyO1 a:X,Y,Z->O:x,y,z Ribonuclease H-like Interaction Interface Pymol
e4cuyB2 a:X,Y,Z->B:x,y,z 40S ribosomal protein S3A N-terminal domain Interaction Interface Pymol
e4cuyc1 a:x,y,z->c:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol